| Protein ZmOFP27 | |
|---|---|
|
ZmOFP27 is a protein in the OVATE family.
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|
| Information | |
| TF Name: | ZmOFP27 |
| Species: | Maize |
| TF Family: | OVATE |
| Gene Name(Synonym): | OFP27 |
| Uniprot ID: | K7UJZ3 |
| Subgenome: | 1 |
Protein ZmOFP27
ZmOFP27 is a protein in the OVATE family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF04844 | |
| Zm00001eb288870_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d038284 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038284 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038284 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d038284 | PChIPseq |  |
sequence | fimo | position |
| Zm00001d038285 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038285 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038285 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d038285 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmOFP27 is the regulator
Interactions where ZmOFP27 is the target
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Zm00001eb288870_T001 from maize genome v5
Amino Acid Sequence
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MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF04844 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATGGCTTGAACCAAATAAATCCCTC...
ATGGCTTGAACCAAATAAATCCCTCGATCCGTTTGAAAACTACTACTACCCCGCCCCCAGCACACCTCTCTACCTCTTATCCCCCGGGCCGGCTTGCTCCTACTCACGCCAGCGCCACAGCTGCACACGTCGCTGTTGACATCAGAGCTGACGCCAATGGTGAGGGGGCTACCCTTCAGCTCCCTCTTGTACACCACCACTAACTCAGCCCAGGACACCCCGCAACCGTCACCGCCGCCAGCCGCTCCTCCACCGGCATGGATGTGGCCGTCCTGCAAGCACCCAAGGACGAGCCAGTACTTGCGGACCCCATCCGCCACCGCCAAGACCATCGCGTCCCTCTTCCTGGACTCCGGGGAGTCGTCCTTCGCCAACTCGTCGGCGCGGACGACGCGCCACGTGGACTGCGCGTCCGACAGCCAGTCCACCGAGTCCGAGGCCCCGGCGGCCGACGACTTCGCGGACGCCATCGTCCGGGGGCTCCGCTCCGACGACCGCCTCCTCTTCGAGCCCCACGGGCCGTCCAGCTCCATCCTGGAGAGGAAGCCTCCGGCGGCGCCTGCCCTGCGGCCGCGAGCGGCGGCGTCCTTCGTTGATGGCGTCGCGGTGGCGTTCGACTCCGCCGACCCGTACCACGACTTCCGGGCTTCCATGCAGGAGATGGTGGCCGCGCACGGCATGGGCGACTGGGACTGGCTCGAGAGGATGCTGGCGTGGTACCTCGGCGCCAACGGCAGGGACACCCACCCCGCCATCGTCACCGCGTTCGTCGACCTCGTCGTCACCATGGCCGCGGCGTCCGCCTCCGCCTGCGCCTGCAGCTCCTCCAGCCGCGTCTCTTCTTTCACGTTCGCCAGCAGTAGCGAGCCGGCCGAGAGCAGCAGCGCCGGCGGCCATTTCTCCTTCGGCCTGAGGTAAACGGTAAACCAAAGCAAACCAGCCGGCCGGACGCTATTATCTGGGTCGTCTCAGTAGCTCCGGCGTGTATCACCATGCCTGTTGTCGTAACTCGTGTGCCAGCAACCGTACGTGTGTGTGCGTGTGTTGTGAGATTTATAGTTGTACCTGATCCAGGTTGATTATATATATATTTTGCTTGTTGCGGTACA
GRMZM2G430871_T01 from maize genome v3
Amino Acid Sequence
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MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
Nucleotide Sequence
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ATGGCTTGAACCAAATAAATCCCTC...
ATGGCTTGAACCAAATAAATCCCTCGATCCGTTTGAAAACTACTACTACCCCGCCCCCAGCACACCTCTCTACCTCTTATCCCCCGGGCCGGCTTGCTCCTACTCACGCCAGCGCCACAGCTGCACACGTCGCTGTTGACATCAGAGCTGACGCCAATGGTGAGGGGGCTACCCTTCAGCTCCCTCTTGTACACCACCACTAACTCAGCCCAGGACACCCCGCAACCGTCACCGCCGCCAGCCGCTCCTCCACCGGCATGGATGTGGCCGTCCTGCAAGCACCCAAGGACGAGCCAGTACTTGCGGACCCCATCCGCCACCGCCAAGACCATCGCGTCCCTCTTCCTGGACTCCGGGGAGTCGTCCTTCGCCAACTCGTCGGCGCGGACGACGCGCCACGTGGACTGCGCGTCCGACAGCCAGTCCACCGAGTCCGAGGCCCCGGCGGCCGACGACTTCGCGGACGCCATCGTCCGGGGGCTCCGCTCCGACGACCGCCTCCTCTTCGAGCCCCACGGGCCGTCCAGCTCCATCCTGGAGAGGAAGCCTCCGGCGGCGCCTGCCCTGCGGCCGCGAGCGGCGGCGTCCTTCGTTGATGGCGTCGCGGTGGCGTTCGACTCCGCCGACCCGTACCACGACTTCCGGGCTTCCATGCAGGAGATGGTGGCCGCGCACGGCATGGGCGACTGGGACTGGCTCGAGAGGATGCTGGCGTGGTACCTCGGCGCCAACGGCAGGGACACCCACCCCGCCATCGTCACCGCGTTCGTCGACCTCGTCGTCACCATGGCCGCGGCGTCCGCCTCCGCCTGCGCCTGCAGCTCCTCCAGCCGCGTCTCTTCTTTCACGTTCGCCAGCAGTAGCGAGCCGGCCGAGAGCAGCAGCGCCGGCGGCCATTTCTCCTTCGGCCTGAGGTAAACGGTAAACCAAAGCAAACCAGCCGGCCGGACGCTATTATCTGGGTCGTCTCAGTAGCTCCGGCGTGTATCACCATGCCTGTTGTCGTAACTCGTGTGCCAGCAACCGTACGTGTGTGTGCGTGTGTTGTGAGATTTATAGTTGTACCTGATCCAGGTTGATTATATATATATTTTGCTTGTTGCGGTACATATAGA
GRMZM2G430871_T02 from maize genome v3
Amino Acid Sequence
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SARTTRHVDCASDSQSTESGGSAPTTASSSSPTG
Nucleotide Sequence
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TCGGCGCGGACGACGCGCCACGTGG...
TCGGCGCGGACGACGCGCCACGTGGACTGCGCGTCCGACAGCCAGTCCACCGAGTCCGGGGGCTCCGCTCCGACGACCGCCTCCTCTTCGAGCCCCACGGGC
Zm00001d038284_T001 from maize genome v4
Amino Acid Sequence
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MVRGLPFSSLLYTTTNSAQDTPQPSPPPAAPPPAWMWPSCKHPRTSQYLRTPSATAKTIASLFLDSGESSFANSSARTTR
HVDCASDSQSTESEAPAADDFADAIVRGLRSDDRLLFEPHGPSSSILERKPPAAPALRPRAAASFVDGVAVAFDSADPYH
DFRASMQEMVAAHGMGDWDWLERMLAWYLGANGRDTHPAIVTAFVDLVVTMAAASASACACSSSSRVSSFTFASSSEPAE
SSSAGGHFSFGLR
Nucleotide Sequence
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ATGGTGAGGGGGCTACCCTTCAGCT...
ATGGTGAGGGGGCTACCCTTCAGCTCCCTCTTGTACACCACCACTAACTCAGCCCAGGACACCCCGCAACCGTCACCGCCGCCAGCCGCTCCTCCACCGGCATGGATGTGGCCGTCCTGCAAGCACCCAAGGACGAGCCAGTACTTGCGGACCCCATCCGCCACCGCCAAGACCATCGCGTCCCTCTTCCTGGACTCCGGGGAGTCGTCCTTCGCCAACTCGTCGGCGCGGACGACGCGCCACGTGGACTGCGCGTCCGACAGCCAGTCCACCGAGTCCGAGGCCCCGGCGGCCGACGACTTCGCGGACGCCATCGTCCGGGGGCTCCGCTCCGACGACCGCCTCCTCTTCGAGCCCCACGGGCCGTCCAGCTCCATCCTGGAGAGGAAGCCTCCGGCGGCGCCTGCCCTGCGGCCGCGAGCGGCGGCGTCCTTCGTTGATGGCGTCGCGGTGGCGTTCGACTCCGCCGACCCGTACCACGACTTCCGGGCTTCCATGCAGGAGATGGTGGCCGCGCACGGCATGGGCGACTGGGACTGGCTCGAGAGGATGCTGGCGTGGTACCTCGGCGCCAACGGCAGGGACACCCACCCCGCCATCGTCACCGCGTTCGTCGACCTCGTCGTCACCATGGCCGCGGCGTCCGCCTCCGCCTGCGCCTGCAGCTCCTCCAGCCGCGTCTCTTCTTTCACGTTCGCCAGCAGTAGCGAGCCGGCCGAGAGCAGCAGCGCCGGCGGCCATTTCTCCTTCGGCCTGAGGTAA
Zm00001d038285_T001 from maize genome v4
Amino Acid Sequence
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MVTTRSTNAVTMAGWVSLPLAPRYHASILSSQSQSPMPCAATISCMEARKSWYGSAESNATATPSTKDAAARGRRAGAAG
GFLSRMELDGPWGSKRRRSSERSPRTMASAKSSAAGASDSVDWLSDAQSTWRVVRADELAKDDSPESRKRDAMVLAVADG
VRKYWLVLGCLQDGHIHAGGGAAGGGDGCGVSWAELVVVYKRELKGSPLTIGVSSDVNSDVCSCGAGAMQLCCCLPAVAG
HADHKRIDQLENDNVSCGDASSSWI
Nucleotide Sequence
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CGCGGCTGGAGGAGCTGCAGGCGCA...
CGCGGCTGGAGGAGCTGCAGGCGCAGGCGGAGGCGGACGCCGCGGCCATGGTGACGACGAGGTCGACGAACGCGGTGACGATGGCGGGGTGGGTGTCCCTGCCGTTGGCGCCGAGGTACCACGCCAGCATCCTCTCGAGCCAGTCCCAGTCGCCCATGCCGTGCGCGGCCACCATCTCCTGCATGGAAGCCCGGAAGTCGTGGTACGGGTCGGCGGAGTCGAACGCCACCGCGACGCCATCAACGAAGGACGCCGCCGCTCGCGGCCGCAGGGCAGGCGCCGCCGGAGGCTTCCTCTCCAGGATGGAGCTGGACGGCCCGTGGGGCTCGAAGAGGAGGCGGTCGTCGGAGCGGAGCCCCCGGACGATGGCGTCCGCGAAGTCGTCGGCCGCCGGGGCCTCGGACTCGGTGGACTGGCTGTCGGACGCGCAGTCCACGTGGCGCGTCGTCCGCGCCGACGAGTTGGCGAAGGACGACTCCCCGGAGTCCAGGAAGAGGGACGCGATGGTCTTGGCGGTGGCGGATGGGGTCCGCAAGTACTGGCTCGTCCTTGGGTGCTTGCAGGACGGCCACATCCATGCCGGTGGAGGAGCGGCTGGCGGCGGTGACGGTTGCGGGGTGTCCTGGGCTGAGTTAGTGGTGGTGTACAAGAGGGAGCTGAAGGGTAGCCCCCTCACCATTGGCGTCAGCTCTGATGTCAACAGCGACGTGTGCAGCTGTGGCGCTGGCGCGATGCAGCTCTGTTGCTGCCTTCCTGCTGTAGCCGGACATGCAGACCACAAGCGCATAGACCAGTTGGAGAACGACAACGTGTCCTGTGGTGATGCCTCATCTTCCTGGATTTAA
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